BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C04SP1|AL425660
(758 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1644 672 0.0
>3x_Contig1644
Length = 13148
Score = 672 bits (331), Expect = 0.0
Identities = 388/423 (91%), Gaps = 3/423 (0%)
Strand = Plus / Minus
Query: 1 gtggaggaggataagrtcttgcagatgtacgagccgtcacatccaatgacaatagtttgt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12261 gtggaggaggataaggtcttgcagatgtacgagccgtcacatccaatgacaatagtttgt 12202
Query: 61 gatggggcagttaaatcctgtacttctccggattcctctagttgccatcctttcmaattc 120
||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 12201 gatggggcagtaaaatcctgtacttctccggattcctctagttgcaatcctttcaaattc 12142
Query: 121 gcttgtmtgagtyctmccaaacctgctatgtmtttmmcmccgmcatgtgtctccgattcg 180
|||||| ||||| || ||||||||||||||| ||| | ||| |||||||||||||||||
Sbjct: 12141 gcttgtatgagttctaccaaacctgctatgtatttaacaccgacatgtgtctccgattcg 12082
Query: 181 tctccgtgtatgamatagtaacaacmgcyacctmagmtctccmccatmmgtygacagcyt 240
||||||||||||| ||||||||||| || |||| || ||||| |||| || |||||| |
Sbjct: 12081 tctccgtgtatgaaatagtaacaacagctacctaagatctccaccataagttgacagctt 12022
Query: 241 tgaacgttgtccattatggagtccgccacacgtaaagagcgttgccaacattcgagaacm 300
|||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 12021 tgaacgttgtccattatggagtccgcaacacgtaaagagcgttgcaaacattcgagaaca 11962
Query: 301 cgtttaccttcacggaagamgtttttggtaacaccttcttcttcaccgatcagagtgagt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11961 cgtttaccttcacggaagaagtttttggtaacaccttcttcttcaccgatcagagtgagt 11902
Query: 361 ycmgttgccccccataamtgtgagccgaggtaaaccagcacacggcattgatctgttttt 420
| ||||||| |||||| ||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 11901 tcagttgcccaccataaatgtgagcagaggtaaac---cgcacggcattgatctgttttt 11845
Query: 421 ttc 423
|||
Sbjct: 11844 ttc 11842
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2069
Number of Sequences: 1807
Number of extensions: 2069
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 758
length of database: 10,358,551
effective HSP length: 16
effective length of query: 742
effective length of database: 10,329,639
effective search space: 7664592138
effective search space used: 7664592138
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (100.0 bits)